Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015834952.1_cds_XP_016505768.1_19068
CDS Infomation

[gene=LOC107823592] [db_xref=GeneID:107823592] [protein=histidine--tRNA ligase, cytoplasmic-like] [protein_id=XP_016505768.1] [location=join(24639..25934,27168..27347,27567..27824,28211..28345,29917..30195,30764..30904,31558..31857)] [gbkey=CDS]
Sequence

ATGGCAGAAGAGAGACGCGTGGTTACAGTGGGTGGAAAAGGCTCATCACTGTCATCCTCC
TCCGTCTTCGAAATCGCCAACGGACTCAGTCGTCTGAGCATTGACTCTTCAGCACTCTCC
AAAGTATCATCTTCCTCCAATTCCAAAACCAGCAACAACACTAATGCTCCTACACAATCT
TCCGCATTTTCAATACTCAGTAATTTAACACCCGAGGAGTCTAAAGCTTCTCTTGTAGTC
CTCCTAAATAAGCTCTTGCTCTCTTCTTCGTCTTCCGCTGCCGTCACTCAGCTCTCTGAT
ATCATCCTCAATGACGTGTCCTCGATTTCGTTTGATAATACTATTGACGGCGTTTCGCCA
GGCGATTTTTCTGTAGCAGCAATATCTGGAATCTCCGCTATATTGGACCATAGAAGTTCA
GCTTTGTCCGTTATTATTGACGCTGTTGCTGCCTTGTCCTGCGAGGCTTTGGGTGCGGAC
ATATTAGCTTTCAACTTGAATGATTCCGGTGATGGTTCCACTGCCAAGGACGTCGTTTCC
GTGGCTGCTGACGTGAAGATCTTACTTAACGGTTCTAAATTCGTGAACAAAAATATTGAT
GAACCTGCAGTTTCTAGTGTTCCAGTTGTGCACGGCAAGTTTAGAGAAATTTGCCGGCTC
CTGCACTCCAGCACTCGTGTACAACTGAACTCTGCTGTTGTATCCAATTCAGGATCTTCT
GGAACAGCTAGTGCAATGTGCACCACGTTGTTTTCATTGGCTGTGGCACTTAAAGATTTG
GGCAACATCAGTTATAACCGAGCGAAGCGCACCAGAGATGATGAAATTTCTGCAATGCTT
CAAAAAGAATGTCCTCGACCTGATCAGCTGAAAGCTGTTTTTGCGTCTTTGGTTTCAGCT
CATTCGGATGAGGAATATGTTAAGTTTTCACATGATGTTAACTCCTTACTGGTGATGGTA
GAGAAAATAGTTTCATGGGAGGCCTTAGCTGCTTTCTTTTCGCTCGAAGAAAATGATTTT
ATCAGTGGTAATACGAGTGTATGCGAGGACAATGCAAAAGCAGGTAAAAAGGGAGGCAAG
AAGAAGAAGATTCTTGGTAAAGGTACCACTGCTCTGCTGCAATATTTGAAGGATAGGCTG
CTGAGCATGCCTATTCAGACCGAGGCATTCGAGAATTTGGTTCGCCATTTCTTGTCTCTG
CTGGACCCGAAGGACTCGGGATTTGGCACATTACTGAGAAAGGTGAAAGATATTGTGGAG
AGCAATGAGAGCCGGCGGTTGCCTAAGCTCCCAAAGGGTACACGTGATTTTGCAAAGGAA
CAGATGGCTATAAGAGAGAAAGCATTCTCAATTATAGTTGAGGTTTTCAAAAGGCATGGT
GCTTCAGCTTTGGATACTCCCGCTTTTGAAATGAGAGAGACACTGATGGGAAAATATGGT
GAAGACTCAAAATTAATCTATGACCTTGCTGATCAGGGGGGAGAACTTTGCTCTCTTCGT
TATGACCTGACAGTTCCTTTTGCTAGATACGTAGCAATGAATGGTCTGACATCCTTCAAG
CGTTATCAGATAGCTAAGGTGTACAGAAGAGATAATCCGTCTAAGGGTAGATACCGTGAA
TTCTACCAATGTGATTTTGATATAGCTGGTCAGTTTGAGAAGATGATGCCTGATTTTGAG
GTCATAAAGATCTTGACCGAGTTGTTAGATGAGCTTGATATTGGAGAGTACGAGGTAAAG
CTTAATCATAGAAAGCTGCTTGATGGTATGTTAGCTATATGCGGGGTGCCACAAGAGAAA
TTCAGAACCATTTGTTCAAGCATTGACAAGCTAGATAAACAATCGTTTGAGCAGATAAAA
AAAGAAATGGCGGATGAGAAAGGCTTAAGTGATGCGATATCAGACAGAATTGGTACATTT
GTCAAATGGAGGGGACCTCCTGTGGAATTGTTATCTAAGCTTAAGCTGGAACGCAGTTTT
TTGGAGAACAATGAATCCTCACTTGCATTGGATGAATTAGATATCATGTTTAAAGCTCTT
GAGAGGTCCAGGTGTATTGACAGAGTCGTTTTTGACTTGAGCCTTGCAAGAGGCCTTGAT
TATTACACAGGAGTCATTTTTGAAGCTGTCTTTAAAGGAGCTACTCAGGTTGGTTCGATT
GCTGCTGGTGGACGTTATGACAATCTAATAGGGATGTTTGGCACACGGCAGGTTCCTGCT
GTTGGGATTAGTCTGGGAATCGAGAGAGTATTTGCAATTATGGAACAGGTTCAGAAAGAC
AAGAATCAGGAAATCCGAGCCACTGAAACTCAAGTTCTCGTTAGCATTCTTGGTGACGAC
AGTGCTTTAGCTGCTGAGCTGGTTGGTGAATTGTGGAATGCTAAAGTGAAAGCAGAATTC
ATGATACATAAAAAAGTGATGAAGCATATTGATCGGGCTAGAGATTCGAGGATCCCTTGG
ATGGTACTTGTTGGTGAACGCGAACTTAGCGAAGGAGTTGTAAAATTGAAGGATGTTGTT
GCAGCTATTGATTATGAAGTCCCCAGAGGTAACCTTGTGAACGATTTATGCAGACGATTA
GGCATGTAA

Peptide Sequence

PEP ID

XP_016505768.1
PEP Infomation

PREDICTED: histidine--tRNA ligase, cytoplasmic-like [Nicotiana tabacum]
Sequence

MAEERRVVTVGGKGSSLSSSSVFEIANGLSRLSIDSSALSKVSSSSNSKTSNNTNAPTQS
SAFSILSNLTPEESKASLVVLLNKLLLSSSSSAAVTQLSDIILNDVSSISFDNTIDGVSP
GDFSVAAISGISAILDHRSSALSVIIDAVAALSCEALGADILAFNLNDSGDGSTAKDVVS
VAADVKILLNGSKFVNKNIDEPAVSSVPVVHGKFREICRLLHSSTRVQLNSAVVSNSGSS
GTASAMCTTLFSLAVALKDLGNISYNRAKRTRDDEISAMLQKECPRPDQLKAVFASLVSA
HSDEEYVKFSHDVNSLLVMVEKIVSWEALAAFFSLEENDFISGNTSVCEDNAKAGKKGGK
KKKILGKGTTALLQYLKDRLLSMPIQTEAFENLVRHFLSLLDPKDSGFGTLLRKVKDIVE
SNESRRLPKLPKGTRDFAKEQMAIREKAFSIIVEVFKRHGASALDTPAFEMRETLMGKYG
EDSKLIYDLADQGGELCSLRYDLTVPFARYVAMNGLTSFKRYQIAKVYRRDNPSKGRYRE
FYQCDFDIAGQFEKMMPDFEVIKILTELLDELDIGEYEVKLNHRKLLDGMLAICGVPQEK
FRTICSSIDKLDKQSFEQIKKEMADEKGLSDAISDRIGTFVKWRGPPVELLSKLKLERSF
LENNESSLALDELDIMFKALERSRCIDRVVFDLSLARGLDYYTGVIFEAVFKGATQVGSI
AAGGRYDNLIGMFGTRQVPAVGISLGIERVFAIMEQVQKDKNQEIRATETQVLVSILGDD
SALAAELVGELWNAKVKAEFMIHKKVMKHIDRARDSRIPWMVLVGERELSEGVVKLKDVV
AAIDYEVPRGNLVNDLCRRLGM

Transcript Sequence

Gene sequence data has not been registered.